STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_2060Conserved hypothetical protein; Identified by Glimmer2; putative. (338 aa)    
Predicted Functional Partners:
VC_2063
Chemotaxis protein CheA; Similar to GB:M34669 SP:P07363 PID:145529 PID:145530 GB:U00096; identified by sequence similarity; putative.
 
 0.993
VC_2064
Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
 
 0.974
cheB1
Protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
 
 
 0.973
VC_2059
Purine-binding chemotaxis protein CheW; Similar to GB:M13462 SP:P07365 PID:145520 GB:U00096 PID:1736540; identified by sequence similarity; putative.
 
  
 0.963
VC_A0189
Response regulator; Similar to PID:1736859 PID:1736868; identified by sequence similarity; putative.
 
 0.961
VC_2061
ParA family protein; Similar to GP:3721574; identified by sequence similarity; putative.
 
 
 
 0.956
VC_A1095
Chemotaxis protein CheA; Similar to GB:M34669 SP:P07363 PID:145529 PID:145530 GB:U00096; identified by sequence similarity; putative.
  
 0.947
VC_2058
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.940
VC_2006
Chemotaxis protein CheV; Similar to GB:AE000511 PID:2313494; identified by sequence similarity; putative.
 
 0.939
VC_2202
Chemotaxis protein CheV; Similar to SP:P37599 GB:U05345 GB:Z29584 PID:453378 PID:580837; identified by sequence similarity; putative.
 
 0.939
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.