Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
VC_2165Arsenate reductase; Similar to GB:U00096 PID:1788841; identified by sequence similarity; putative. (116 aa)    
Predicted Functional Partners:
VC_2167
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.936
VC_2164
Conserved hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
  
  
 0.933
VC_2166
Trp repressor-binding protein; Similar to GB:M99166 SP:P30849 PID:148264 GB:U00096 PID:1651499; identified by sequence similarity; putative.
  
    0.896
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.723
VC_2162
Permease PerM, putative; Similar to GB:U00096 SP:P77406 PID:1621505 PID:1788838; identified by sequence similarity; putative.
     
 0.717
VC_2163
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the sulfur carrier protein TusA family.
       0.711
VC_1068
Transcriptional regulator, ArsR family; Similar to SP:P15905 GB:X16045 PID:42717; identified by sequence similarity; putative.
     
 0.681
VC_A0178
frnE protein; Similar to GP:3170570; identified by sequence similarity; putative.
    
 
 0.680
VC_2280
Hypothetical protein; Identified by Glimmer2; putative.
 
      0.678
VC_A0549
phnA protein; Similar to SP:P16680 GB:U14003 PID:147194 PID:536952 GB:U00096; identified by sequence similarity; putative.
 
   
 0.581
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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