STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_2206Conserved hypothetical protein; Identified by Glimmer2; putative. (145 aa)    
Predicted Functional Partners:
VC_2207
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.973
VC_2208
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.949
VC_2601
Sodium-type flagellar protein MotX; Similar to GB:U09005 SP:P40608 PID:507737; identified by sequence similarity; putative.
  
   
 0.853
VC_2058
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.765
VC_1909
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.759
VC_1885
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.751
VC_2344
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.751
VC_2557
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.745
VC_0097
Flagellar protein FliL, putative; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
    0.732
VC_1008
Sodium-type flagellar protein MotY; Similar to GB:U06949 SP:P46233 PID:497129; identified by sequence similarity; putative.
  
   
 0.722
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.