STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_25131-acyl-sn-glycerol-3-phosphate acyltransferase; Similar to GB:M68936 SP:P26974 PID:154236; identified by sequence similarity; putative; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (261 aa)    
Predicted Functional Partners:
plsB
Glycerol-3-phosphate acyltransferase; Similar to GP:147295; identified by sequence similarity; putative; Belongs to the GPAT/DAPAT family.
 
 
 0.927
VC_2255
Phosphatidate cytidylyltransferase; Similar to GB:L42023 SP:P44937 PID:1006039 PID:1221024 PID:1205166; identified by sequence similarity; putative; Belongs to the CDS family.
    
 0.832
VC_1936
Phosphatidate cytidylyltransferase, putative; Similar to GB:U00096 PID:1742297 PID:1742302 PID:1787677; identified by sequence similarity; putative; Belongs to the CDS family.
  
 
 0.818
VC_2517
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.778
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
  
 0.767
VC_1198
Conserved hypothetical protein; Identified by Glimmer2; putative.
    
 0.756
VC_A0985
Oxidoreductase/iron-sulfur cluster-binding protein; Similar to GB:AE000511 PID:2314381; identified by sequence similarity; putative.
    
 0.756
VC_2515
BolA/YrbA family protein; Similar to SP:P43781 PID:606128 GB:U00096 PID:1789581; identified by sequence similarity; putative; Belongs to the BolA/IbaG family.
       0.747
VC_2516
Anti-sigma B factor antagonist, putative; Similar to SP:P45389 PID:606129 GB:U00096 PID:1789582; identified by sequence similarity; putative.
       0.747
VC_2518
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.747
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.