STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_2569Hypothetical protein; Identified by Glimmer2; putative. (160 aa)    
Predicted Functional Partners:
VC_2568
Peptidyl-prolyl cis-trans isomerase, FKBP-type; Similar to GB:U14003 SP:P39311 PID:537048 GB:U00096 PID:1790652; identified by sequence similarity; putative.
       0.548
VC_2739
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.491
VC_A0030
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.491
VC_A0031
Methyl-accepting chemotaxis protein; Similar to PID:1255679; identified by sequence similarity; putative.
      
 0.491
VC_2740
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.469
VC_2567
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.408
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.