Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_2601Sodium-type flagellar protein MotX; Similar to GB:U09005 SP:P40608 PID:507737; identified by sequence similarity; putative. (211 aa)    
Predicted Functional Partners:
VC_2206
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 
 0.975
VC_1008
Sodium-type flagellar protein MotY; Similar to GB:U06949 SP:P46233 PID:497129; identified by sequence similarity; putative.
  
 
 0.974
VC_2208
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 
 0.970
VC_2200
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
    
 
 0.873
VC_2133
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
 
 
 0.872
VC_2207
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.857
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
    
 
 0.850
fliE
Flagellar hook-basal body complex protein FliE; Similar to PID:2338730; identified by sequence similarity; putative.
    
 
 0.842
VC_0893
Chemotaxis protein PomB; Similar to PID:2130949; identified by sequence similarity; putative.
  
  
 0.825
VC_2197
Flagellar hook protein FlgE; Similar to GB:X51737 SP:P16322 GB:X52093 PID:47673; identified by sequence similarity; putative.
  
 
 
 0.824
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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