STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_2603Asparaginase, putative; Similar to SP:P37595 GB:U00096 PID:1787050; identified by sequence similarity; putative. (326 aa)    
Predicted Functional Partners:
VC_0991
Asparagine synthetase B, glutamine-hydrolyzing; Similar to GB:J05554 SP:P22106 PID:145393 GB:U00096 PID:1651277; identified by sequence similarity; putative.
     
 0.822
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.815
VC_2698
Aspartate ammonia-lyase; Similar to GB:L42023 SP:P44324 PID:1003952 PID:1222469 PID:1204785; identified by sequence similarity; putative.
    
 0.803
VC_2364
Aspartokinase I/homoserine dehydrogenase, threonine-sensitive; Similar to SP:P27725; identified by sequence similarity; putative; In the C-terminal section; belongs to the homoserine dehydrogenase family.
     
 0.758
VC_2684
Aspartokinase II/homoserine dehydrogenase, methionine-sensitive; Similar to GB:L19201 SP:P00562 GB:J01651 GB:V00305 PID:146841; identified by sequence similarity; putative; In the C-terminal section; belongs to the homoserine dehydrogenase family.
     
 0.758
VC_1995
Similar to SP:P18840 PID:145279 GB:U00096 PID:1742878 PID:1788065; identified by sequence similarity; putative.
    
 0.660
VC_0170
Peptide ABC transporter, ATP-binding protein; Similar to GB:U00096 PID:1787051; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
  
 0.652
VC_A1101
ABC transporter, ATP-binding protein; Similar to SP:P33916 PID:405909 GB:U00096 PID:1736845 PID:1788506; identified by sequence similarity; putative.
  
  
 0.652
carB
Carbamoyl-phosphate synthase, large subunit; Similar to GB:D10483 SP:P00968 GB:J01597 GB:V01500 PID:145464; identified by sequence similarity; putative.
    
 0.633
VC_A0513
Amino acid biosynthesis aminotransferase; Similar to PID:1806263; identified by sequence similarity; putative.
   
 
 0.624
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.