STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC_2761Multidrug resistance protein; Similar to GB:U00096 PID:1742733 PID:1742743 PID:1787950; identified by sequence similarity; putative. (409 aa)    
Predicted Functional Partners:
VC_2760
Transcriptional regulator, LysR family; Similar to SP:P37598 GB:U00096 PID:1742732 PID:1742742 PID:1787949; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
 
     0.808
deoD2
Purine nucleoside phosphorylase; Similar to GB:U14003 SP:P09743 GB:M60917 PID:147309 PID:537224; identified by sequence similarity; putative.
      
 0.470
VC_1449
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.450
VC_1391
Multidrug transporter, putative; Similar to GB:AL009126; identified by sequence similarity; putative.
  
   
 0.422
VC_1597
Multidrug transporter, putative; Similar to PID:1217600; identified by sequence similarity; putative.
  
   
 0.412
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.