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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0075Hypothetical protein; Identified by Glimmer2; putative. (155 aa)    
Predicted Functional Partners:
VC_A0074
GGDEF family protein; Similar to GP:1800009; identified by sequence similarity; putative.
  
    0.788
VC_1267
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.564
VC_1266
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.540
VC_A0043
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.510
VC_1264
Iron-regulated protein A, putative; Similar to SP:P12608 PID:154525; identified by sequence similarity; putative.
  
     0.463
VC_A0562
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.447
VC_1665
ABC transporter, permease protein, putative; Similar to GB:U00096 PID:1742865 PID:1788052; identified by sequence similarity; putative.
  
     0.443
VC_A0076
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.443
VC_1667
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.424
VC_2352
NupC family protein; Similar to GB:L42023 SP:P44742 PID:1003922 PID:1222453 PID:1204770; identified by sequence similarity; putative.
      
 0.405
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.