STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0102CbbY family protein; Similar to GB:U00096 PID:1789046; identified by sequence similarity; putative. (219 aa)    
Predicted Functional Partners:
VC_1698
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.660
VC_1610
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.567
VC_A0103
Sulfate permease family protein; Similar to GB:AL123456; identified by sequence similarity; putative.
  
    0.517
kefB
Glutathione-regulated potassium-efflux system protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
   
 
 0.511
VC_0421
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.503
VC_A0517
1-phosphofructokinase; Similar to SP:P23539 GB:X53948 PID:405894 PID:41487 GB:U00096; identified by sequence similarity; putative; Belongs to the carbohydrate kinase PfkB family.
 
    0.488
VC_A0100
Phage shock protein E; Similar to GP:7226016; identified by sequence similarity; putative.
  
    0.460
VC_A0101
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.459
VC_0302
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.453
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 
 0.437
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.