STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0136Glycerophosphoryl diester phosphodiesterase; Similar to SP:P09394 GB:X56907 GB:Y00536 PID:41581 PID:902489; identified by sequence similarity; putative. (371 aa)    
Predicted Functional Partners:
VC_1554
Glycerophosphoryl diester phosphodiesterase, putative; Similar to SP:P54527 PID:1303930 GB:AL009126; identified by sequence similarity; putative.
  
  
0.943
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.927
VC_0135
Lysophospholipase L2; Similar to PID:1449198; identified by sequence similarity; putative.
    
 0.907
VC_A0747
Anaerobic glycerol-3-phosphate dehydrogenase, subunit A; Similar to GB:M20938 SP:P13032 PID:146177 GB:U00096 PID:1788574; identified by sequence similarity; putative.
 
 0.823
glpB
Anaerobic glycerol-3-phosphate dehydrogenase, subunit B; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.
  
    0.784
VC_A0137
Glycerol-3-phosphate transporter; Similar to SP:P08194 GB:Y00536 PID:41587 GB:U00096 PID:1788573; identified by sequence similarity; putative.
  
  
 0.754
VC_1215
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Similar to GB:M12299 SP:P06978 PID:473749 GB:U00096 PID:1736571; identified by sequence similarity; putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.625
VC_A0657
Aerobic glycerol-3-phosphate dehydrogenase; Similar to SP:P13035 GB:M21277 GB:M55989 GB:M96795 PID:146181; identified by sequence similarity; putative; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.617
VC_A0707
Regulatory protein UhpC, putative; Similar to GB:M89480 SP:P27669 GB:X52093 PID:154410; identified by sequence similarity; putative.
 
  
 0.567
VC_1667
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.532
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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