Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
VC_A0267Multidrug resistance protein D; Similar to GB:X78969 PID:474915; identified by sequence similarity; putative. (379 aa)    
Predicted Functional Partners:
VC_A0266
Transcriptional regulator, AraC/XylS family; Similar to GB:U00096 PID:1788091; identified by sequence similarity; putative.
 
     0.812
VC_1410
Multidrug resistance protein VceA; Similar to GP:3378278; identified by sequence similarity; putative.
  
 
 0.645
VC_1391
Multidrug transporter, putative; Similar to GB:AL009126; identified by sequence similarity; putative.
  
   
 0.520
VC_0629
Multidrug resistance protein, putative; Similar to GB:U00096 PID:1736781 PID:1736784 PID:1788390 GB:U00096; identified by sequence similarity; putative; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
      
 0.493
VC_1675
Multidrug resistance protein, putative; Similar to GB:L11616 PID:438853 SP:P52477; identified by sequence similarity; putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
      
 0.492
VC_0776
Ferric vibriobactin ABC transporter, periplasmic ferric vibriobactin-binding protein; Similar to GB:M29730 SP:P14609 GB:X53274 PID:145944 PID:581195; identified by sequence similarity; putative.
   
  
 0.483
VC_0068
Transcriptional regulator, LysR family; Similar to GB:L10328 SP:P31463 PID:290559 GB:U00096 PID:1790147; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
      
 0.482
VC_1597
Multidrug transporter, putative; Similar to PID:1217600; identified by sequence similarity; putative.
  
   
 0.473
gbpA
Chitinase, putative; Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin. This function enhances bacterial colonization in the gastrointestinal tract and may also be important in the environment by augment colonization of chitinous structures, leading to improved survival. Promotes bacterial attachment to, and colonization of, zooplankton in the aquatic ecosystem; Belongs to the GbpA family.
      
 0.472
VC_0780
Vibriobactin synthase component D; Similar to SP:P19925 GB:U00096 PID:1651241 PID:1778499 PID:1786797; identified by sequence similarity; putative; Belongs to the P-Pant transferase superfamily.
      
 0.467
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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