STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0458Hypothetical protein; Identified by Glimmer2; putative. (285 aa)    
Predicted Functional Partners:
VC_A0023
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.708
VC_A0457
Hypothetical protein; Identified by Glimmer2; putative.
       0.478
VC_A0459
Hypothetical protein; Identified by Glimmer2; putative.
       0.478
VC_2601
Sodium-type flagellar protein MotX; Similar to GB:U09005 SP:P40608 PID:507737; identified by sequence similarity; putative.
  
     0.475
VC_A0048
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.470
VC_2662
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.447
VC_2557
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.432
VC_1909
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.431
VC_A0312
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.416
VC_A0386
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.416
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.