Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_A0554Oxalate/formate antiporter, putative; Similar to GB:AE000782; identified by sequence similarity; putative. (410 aa)    
Predicted Functional Partners:
VC_A0552
Fatty acid cis/trans isomerase; Similar to GP:2612821; identified by sequence similarity; putative.
       0.611
VC_A0555
Hypothetical protein; Identified by Glimmer2; putative.
       0.601
hmp
Ferrisiderophore reductase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity). Belongs to the globin family. Two-domain flavohemoproteins subfamily.
     
 0.600
VC_A0556
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.533
VC_2373
Glutamate synthase, large subunit; Similar to GB:X80485 PID:515938 SP:P55037 PID:1652093; identified by sequence similarity; putative.
      
 0.531
VC_2376
Glutamate synthase, large subunit; Similar to PID:606151 GB:U00096 PID:1789605; identified by sequence similarity; putative.
      
 0.531
VC_A0553
Hypothetical protein; Identified by Glimmer2; putative.
       0.476
VC_0964
PTS system, glucose-specific IIA component; Similar to GB:J02796 SP:P08837 GB:M93578 GB:M93579 GB:M93580; identified by sequence similarity; putative.
   
 
 0.458
VC_2270
Riboflavin synthase, alpha subunit; Similar to GB:L11391 PID:496180 SP:P51961; identified by sequence similarity; putative.
   
    0.421
VC_1527
Molybdopterin biosynthesis MoeA protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.414
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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