Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_A0574Conserved hypothetical protein; Identified by Glimmer2; putative. (893 aa)    
Predicted Functional Partners:
VC_A0530
Pyruvate-flavoredoxin oxidoreductase; Similar to GB:U00096 PID:1742250 PID:1742256 PID:1787642; identified by sequence similarity; putative.
  
 
 0.848
pta
Phosphate acetyltransferase; Involved in acetate metabolism; In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.758
VC_0486
Transcriptional regulator, DeoR family; Similar to GB:J02708 SP:P15082 GB:X13463 PID:146282 PID:41630; identified by sequence similarity; putative.
    
   0.689
VC_1553
Glycerol-3-phosphate regulon repressor; Similar to SP:P09392 GB:M96795 PID:146186 PID:606358 GB:U00096; identified by sequence similarity; putative.
    
   0.689
VC_A0247
Transcriptional regulator, DeoR family; Similar to GB:U14003 SP:P39299 PID:537032 GB:U00096 PID:1790635; identified by sequence similarity; putative.
    
   0.689
VC_A0940
Transcriptional regulator, DeoR family; Similar to SP:P09392 GB:M96795 PID:146186 PID:606358 GB:U00096; identified by sequence similarity; putative.
    
   0.689
guaB
Inosine-5`-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.662
VC_A0573
DamX-related protein; Similar to SP:P11557 GB:Z19601 PID:41226 PID:43274 PID:606322; identified by sequence similarity; putative.
       0.564
nnr
Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity). In the N-terminal section; belongs to the NnrE/AIBP family.
 
    0.561
VC_1340
prpE protein; Similar to GB:U00096 SP:P77495 PID:1657531 PID:1786529; identified by sequence similarity; putative.
 
   
 0.510
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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