STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0586Conserved hypothetical protein; Identified by Glimmer2; putative. (198 aa)    
Predicted Functional Partners:
VC_A0587
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.799
VC_A0585
Glutathione S-transferase, putative; Similar to PID:2266412; identified by sequence similarity; putative.
 
   
 0.662
VC_A0584
Glutathione S-transferase, putative; Similar to PID:643638; identified by sequence similarity; putative; Belongs to the GST superfamily.
     
 0.573
VC_A1001
Transcriptional regulator, AraC/XylS family; Similar to GP:3294250; identified by sequence similarity; putative.
  
   
 0.519
VC_0781
Transcriptional regulator, LysR family; Similar to GB:D10483 SP:P10151 GB:M21150 PID:1128961 PID:146605; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family.
  
 
   0.443
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.433
VC_A0266
Transcriptional regulator, AraC/XylS family; Similar to GB:U00096 PID:1788091; identified by sequence similarity; putative.
 
   
 0.422
VC_A0937
Transcriptional regulator, AraC/XylS family; Similar to GB:U00096 PID:1788091; identified by sequence similarity; putative.
 
   
 0.415
VC_A0993
N-ethylmaleimide reductase; Similar to GB:U00096 SP:P77258 PID:1711244 PID:1787939; identified by sequence similarity; putative.
  
  
 0.415
VC_A0998
NADH-dependent flavin oxidoreductase, Oye family; Similar to PID:1655954; identified by sequence similarity; putative.
  
  
 0.415
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.