Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
VC_A0667Sodium/solute symporter; Similar to PID:1653432; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (513 aa)    
Predicted Functional Partners:
VC_A0666
L-serine dehydratase 1; Similar to GB:M28695 SP:P16095 PID:290464 GB:U00096 PID:1736451; identified by sequence similarity; putative; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.778
VC_A0668
Hypothetical protein; Identified by Glimmer2; putative.
       0.651
VC_A1072
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.495
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.469
gpt
Xanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
   
  
 0.469
VC_A0568
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.448
VC_A0669
Sugar transporter family protein; Similar to SP:P41036 PID:606163 PID:639470 GB:U00096 PID:1789618; identified by sequence similarity; putative.
     
 0.440
VC_0194
Gamma-glutamyltranspeptidase; Similar to GB:AL123456; identified by sequence similarity; putative.
  
  
 0.426
VC_A0558
Similar to GB:AL009126; identified by sequence similarity; putative.
  
  
 0.426
VC_1776
N-acetylneuraminate lyase, putative; Similar to GB:L42023 SP:P44539 PID:1003186 PID:1222055 PID:1204400; identified by sequence similarity; putative; Belongs to the DapA family.
 
  
 0.413
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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