STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0684Regulatory protein UhpC; Similar to GB:L10328 SP:P09836 GB:M89479 PID:148114 PID:148119; identified by sequence similarity; putative. (436 aa)    
Predicted Functional Partners:
VC_A0683
Sensor protein UhpB; Similar to GB:M89480 SP:P27668 PID:154409; identified by sequence similarity; putative.
  
 
 0.759
VC_A0685
iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative.
  
  
 0.725
VC_A0682
Transcriptional regulator UhpA; Similar to GB:L10328 SP:P10940 GB:M89479 PID:148112 PID:148117; identified by sequence similarity; putative.
     
 0.588
glpB
Anaerobic glycerol-3-phosphate dehydrogenase, subunit B; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.
 
    0.528
VC_A0706
Phosphoglycerate transport regulatory protein PgtC, putative; Similar to GB:M21279 SP:P37591 GB:X52093 PID:154258; identified by sequence similarity; putative.
 
  
 0.526
VC_A0603
ABC transporter, periplasmic substrate-binding protein; Similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative.
  
  
 0.462
VC_0608
iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to PID:1651916; identified by sequence similarity; putative.
  
  
 0.460
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.457
VC_A0772
Tyrosine-specific transport protein; Similar to GB:M23240 SP:P18199 PID:148089 GB:U00096 PID:1736569; identified by sequence similarity; putative.
  
   
 0.449
VC_A0554
Oxalate/formate antiporter, putative; Similar to GB:AE000782; identified by sequence similarity; putative.
  
 
 0.445
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.