Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_A0688Polyhydroxyalkanoic acid synthase; Similar to GB:U04848 GB:L37761 PID:443736 PID:576785; identified by sequence similarity; putative. (591 aa)    
Predicted Functional Partners:
VC_A0691
acetoacetyl-CoA reductase; Similar to PID:576783 SP:P50203; identified by sequence similarity; putative.
 
 
 0.990
fadJ
Fatty oxidation complex, alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.938
fadB
Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
   
 
 0.938
VC_A0689
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.824
VC_A0690
acetyl-CoA acetyltransferase; Similar to PID:1262448; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.821
pta
Phosphate acetyltransferase; Involved in acetate metabolism; In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.467
VC_1403
Methyl-accepting chemotaxis protein; Similar to GB:Pyro_h; identified by sequence similarity; putative.
      
 0.466
VC_1394
Methyl-accepting chemotaxis protein; Similar to GB:AE000511 PID:2313186; identified by sequence similarity; putative.
      
 0.441
VC_A1088
Methyl-accepting chemotaxis protein; Similar to GB:Pyro_h; identified by sequence similarity; putative.
      
 0.432
ackA1
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
  
 0.425
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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