STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0689Conserved hypothetical protein; Identified by Glimmer2; putative. (115 aa)    
Predicted Functional Partners:
VC_A0688
Polyhydroxyalkanoic acid synthase; Similar to GB:U04848 GB:L37761 PID:443736 PID:576785; identified by sequence similarity; putative.
 
   
 0.824
VC_A0690
acetyl-CoA acetyltransferase; Similar to PID:1262448; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.736
VC_A0691
acetoacetyl-CoA reductase; Similar to PID:576783 SP:P50203; identified by sequence similarity; putative.
     
 0.716
VC_A0284
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.480
VC_A0105
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.446
VC_A0112
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.431
VC_1187
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.413
grx
Glutaredoxin 1; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity).
  
     0.406
VC_0300
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.402
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.