STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxpAConserved hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (246 aa)    
Predicted Functional Partners:
VC_A0778
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 0.998
VC_A0777
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.997
VC_0194
Gamma-glutamyltranspeptidase; Similar to GB:AL123456; identified by sequence similarity; putative.
     
  0.900
gshA
Glutamate--cysteine ligase; Similar to SP:P06980 GB:X03954 PID:581100 GB:U00096 PID:1789044; identified by sequence similarity; putative; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
  0.900
VC_1492
Conserved hypothetical protein; Identified by Glimmer2; putative.
    
  0.805
glnAv
Glutamate--ammonia ligase; Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia; Belongs to the glutamine synthetase family.
   
 
  0.803
glsA
Glutaminase family protein; Similar to GB:U00096 SP:P77470 PID:1742497 PID:1742506 PID:1787804; identified by sequence similarity; putative; Belongs to the glutaminase family.
     
  0.800
VC_2374
Glutamate synthase, small subunit; Similar to GB:AL123456; identified by sequence similarity; putative.
     
  0.800
VC_2376
Glutamate synthase, large subunit; Similar to PID:606151 GB:U00096 PID:1789605; identified by sequence similarity; putative.
     
  0.800
VC_2377
Glutamate synthase, small subunit; Similar to PID:606152 GB:U00096 PID:1789606; identified by sequence similarity; putative.
     
  0.800
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.