Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
VC_A0795Resolvase, putative; Similar to SP:P05823 GB:M15197 PID:154868; identified by sequence similarity; putative. (318 aa)    
Predicted Functional Partners:
VC_A0796
Hypothetical protein; Identified by Glimmer2; putative.
       0.543
VC_A0791
Transposase OrfAB, subunit B; Similar to GP:3337013; identified by sequence similarity; putative.
 
   
 0.519
VC_A0793
Hypothetical protein; Identified by Glimmer2; putative.
       0.437
VC_A0794
Hypothetical protein; Identified by Glimmer2; putative.
       0.437
VC_A0792
Transposase OrfAB, subunit A; Similar to SP:P39213; identified by sequence similarity; putative.
 
   
 0.436
kefB
Glutathione-regulated potassium-efflux system protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
   
    0.429
xseB
Exodeoxyribonuclease, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
   
    0.428
VC_1074
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.422
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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