STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0802Conserved hypothetical protein; Identified by Glimmer2; putative. (657 aa)    
Predicted Functional Partners:
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
    
 0.665
VC_A0803
Serine protease, putative; Similar to PID:1336053; identified by sequence similarity; putative.
     
 0.579
VC_0239
Conserved hypothetical protein; Identified by Glimmer2; putative.
    
 0.464
VC_A0536
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.455
VC_1538
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.426
VC_A0714
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
 
   
 0.422
VC_0245
rfbG protein; Similar to GB:X59554 PID:48387; identified by sequence similarity; putative.
    
 0.420
VC_0259
Lipopolysaccharide biosynthesis protein RfbV; Similar to GB:X59554 PID:48400 PID:1929424; identified by sequence similarity; putative.
    
 0.420
VC_0920
Exopolysaccharide biosynthesis protein EpsF, putative; Similar to GP:1276879; identified by sequence similarity; putative.
    
 0.420
VC_0925
Polysaccharide biosynthesis protein, putative; Similar to GB:AE000666; identified by sequence similarity; putative.
    
 0.420
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.