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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0812Leucine aminopeptidase-related protein; Similar to PID:1694931; identified by sequence similarity; putative. (476 aa)    
Predicted Functional Partners:
VC_1952
Chitinase; Similar to GP:3851166; identified by sequence similarity; putative.
 
  
 0.879
VC_A0700
Chitodextrinase; Similar to GP:3928775; identified by sequence similarity; putative.
 
  
  0.866
VC_A0027
Chitinase; Similar to SP:P32823 PID:216207; identified by sequence similarity; putative.
 
  
  0.852
VC_A0813
Aminopeptidase; Similar to PID:1694931; identified by sequence similarity; putative.
 
  
0.825
gbpA
Chitinase, putative; Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin. This function enhances bacterial colonization in the gastrointestinal tract and may also be important in the environment by augment colonization of chitinous structures, leading to improved survival. Promotes bacterial attachment to, and colonization of, zooplankton in the aquatic ecosystem; Belongs to the GbpA family.
 
  
 0.773
VC_1200
Trypsin, putative; Similar to SP:P51588; identified by sequence similarity; putative.
 
   
 0.761
VC_A0803
Serine protease, putative; Similar to PID:1336053; identified by sequence similarity; putative.
 
   
 0.747
VC_1073
Chitinase, putative; Similar to PID:1698444; identified by sequence similarity; putative.
  
  
  0.738
VC_A0096
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.717
VC_0157
Alkaline serine protease; Similar to GB:M25499 SP:P16588 PID:155251; identified by sequence similarity; putative; Belongs to the peptidase S8 family.
 
  
0.699
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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