STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0924Conserved hypothetical protein; Identified by Glimmer2; putative. (662 aa)    
Predicted Functional Partners:
cysJ
Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.990
cysI
Sulfite reductase (NADPH) hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.977
vibA
Vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Involved in an early step of the biosynthesis of the catechol siderophore vibriobactin. Vibriobactin is a chelating compound involved in transporting iron from the bacterial environment into the cell cytoplasm.
  
 0.941
VC_1059
Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to SP:P31808 GB:U17433 PID:603171 GB:U00096 PID:1742066; identified by sequence similarity; putative.
  
 0.941
VC_1591
Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to SP:Q11020 PID:1419053 GB:AL123456; identified by sequence similarity; putative.
  
 0.941
VC_1815
C-factor, putative; Similar to PID:1652815; identified by sequence similarity; putative.
  
 0.941
fabG
3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.941
VC_2047
Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to SP:P37079 GB:X66059 GB:Y00525 PID:43939; identified by sequence similarity; putative.
  
 0.941
VC_A0301
Oxidoreductase, short-chain dehydrogenase/reductase family; Similar to PID:887852 GB:U00096 PID:1773222 PID:2160242 PID:2367175; identified by sequence similarity; putative.
  
 0.941
VC_A0691
acetoacetyl-CoA reductase; Similar to PID:576783 SP:P50203; identified by sequence similarity; putative.
  
 0.941
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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