STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0958Hypothetical protein; Identified by Glimmer2; putative. (505 aa)    
Predicted Functional Partners:
VC_0815
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.842
VC_A0530
Pyruvate-flavoredoxin oxidoreductase; Similar to GB:U00096 PID:1742250 PID:1742256 PID:1787642; identified by sequence similarity; putative.
    
 0.801
VC_A0957
Malate synthase-related protein; Similar to SP:P37330 GB:X74547 PID:517247 PID:882505 GB:U00096; identified by sequence similarity; putative.
 
   
 0.732
argA
N-acetylglutamate synthase; Similar to SP:P08205 GB:Y00492 PID:581038 PID:882710 GB:U00096; identified by sequence similarity; putative.
    
  0.694
VC_0600
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.643
VC_A0185
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.624
VC_1531
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.504
VC_2032
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.503
VC_1791
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.494
VC_1247
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.436
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.