Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VC_A0978Amino acid ABC transporter, periplasmic amino acid-binding protein, putative; Similar to GB:J01805 SP:P02910 GB:V01372 GB:V01373 GB:X52093; identified by sequence similarity; putative. (243 aa)    
Predicted Functional Partners:
VC_A0980
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.782
VC_A0979
Methyl-accepting chemotaxis protein; Similar to GB:L29189 SP:P39216 PID:459689 GB:AL009126; identified by sequence similarity; putative.
       0.761
VC_1603
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.680
VC_1601
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.631
VC_2622
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.615
VC_A0981
Hypothetical protein; Identified by Glimmer2; putative.
 
    
0.579
VC_A0189
Response regulator; Similar to PID:1736859 PID:1736868; identified by sequence similarity; putative.
  
 
   0.554
VC_1862
Amino acid ABC transporter, permease protein; Similar to PID:1166637 SP:P52094 GB:U00096 PID:1788646 PID:1799689; identified by sequence similarity; putative.
 
 
 0.513
VC_A0212
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.495
VC_1863
Amino acid ABC transporter, periplasmic amino acid-binding protein; Similar to PID:1166635 GB:U00096 PID:1788649 PID:1799691; identified by sequence similarity; putative; Belongs to the bacterial solute-binding protein 3 family.
  
     0.493
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.