Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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cheDChemotaxis protein CheD, putative; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (233 aa)    
Predicted Functional Partners:
VC_1083
Hypothetical protein; Identified by Glimmer2; putative.
 
 0.993
VC_A1095
Chemotaxis protein CheA; Similar to GB:M34669 SP:P07363 PID:145529 PID:145530 GB:U00096; identified by sequence similarity; putative.
 
  
 0.991
cheR3
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
  
 0.986
VC_A1092
Methyl-accepting chemotaxis protein; Similar to SP:P02942 GB:J01718 GB:V00373 PID:148077 PID:537197; identified by sequence similarity; putative.
 
  0.981
VC_A1094
Purine-binding chemotaxis protein CheW; Similar to GB:M13462 SP:P07365 PID:145520 GB:U00096 PID:1736540; identified by sequence similarity; putative.
 
  
 0.977
VC_A1093
Purine-binding chemotaxis protein CheW; Similar to GB:M13462 SP:P07365 PID:145520 GB:U00096 PID:1736540; identified by sequence similarity; putative.
 
  
 0.976
VC_A0189
Response regulator; Similar to PID:1736859 PID:1736868; identified by sequence similarity; putative.
 
 
 0.966
VC_0098
Methyl-accepting chemotaxis protein; Similar to SP:P07017 PID:145521 GB:U00096 PID:1736539 PID:1736545; identified by sequence similarity; putative.
 
 0.960
VC_A0988
Methyl-accepting chemotaxis protein; Similar to GB:X61367 PID:48195; identified by sequence similarity; putative.
 
  0.950
VC_A0658
Methyl-accepting chemotaxis protein; Similar to GB:X61367 PID:48195; identified by sequence similarity; putative.
 
 0.944
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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