Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VC_A1102Conserved hypothetical protein; Identified by Glimmer2; putative. (550 aa)    
Predicted Functional Partners:
lpxM
Lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.
     
 0.912
VC_1867
Conserved hypothetical protein; Identified by Glimmer2; putative.
     
 0.902
VC_A1103
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.856
VC_A0714
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
 
   
 0.719
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
    
   0.622
VC_2195
Flagellar basal-body rod protein FlgG; Similar to GB:U00096 SP:P75939 PID:1787318; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
    
 
 0.610
VC_0395
UTP--glucose-1-phosphate uridylyltransferase; Similar to GB:U03751 PID:432985 SP:Q59633 PID:1345068; identified by sequence similarity; putative.
      
 0.548
VC_1367
GGDEF family protein; Similar to PID:633121; identified by sequence similarity; putative.
   
 
 0.492
VC_1543
Hypothetical protein; Identified by Glimmer2; putative.
   
 
 0.480
VC_A0051
Hypothetical protein; Identified by Glimmer2; putative.
   
 
 0.480
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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