Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CV_0043Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0790. (221 aa)    
Predicted Functional Partners:
flgC2
Flagellar basal-body rod protein flgC; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1558; Belongs to the flagella basal body rod proteins family.
   
 
 0.697
flgC1
Flagellar basal-body rod protein flgC; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1558; Belongs to the flagella basal body rod proteins family.
   
 
 0.697
CV_3012
Probable serine carboxypeptidase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
  
 
 
 0.547
cysE
Serine O-acetyltransferase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1045.
       0.541
CV_3849
Probable serine/threonine kinase; Identified by sequence similarity; putative; ORF located using Blastx/COG0515.
      0.514
dnaJ
Heat shock protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
   
 
 0.496
thdF
Thiophene and furan oxidation protein ThdF; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.463
CV_1906
Hypothetical protein.
    
 
 0.448
CV_1907
Hypothetical protein.
    
 
 0.430
CV_1701
Probable flagellar basal-body rod protein flgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
    
 
 0.423
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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