Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CV_0048Probable transport transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0477/TC:2.A.1.3.12. (506 aa)    
Predicted Functional Partners:
CV_0047
Probable transcriptional regulator, MarR family; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1846.
 
   
 0.814
emrY
Multidrug resistence transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0477/TC:2.A.1.3.15.
  
     0.764
CV_0709
Probable multidrug resistance transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1566/TC:8.A.1.1.1.
 
 
 0.736
emrA
Multidrug resistance secretion protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1566/TC:8.A.1.1.1.
 
 
 0.718
CV_1510
Probable multidrug resistance protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0477/TC:2.A.1.2.7.
  
   
 0.619
CV_0020
Probable MFS transporter; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0477/TC:2.A.1.2.7.
  
   
 0.610
gcvA
Glycine cleavage activator protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0583; Belongs to the LysR transcriptional regulatory family.
       0.442
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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