Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_0135Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0579. (364 aa)    
Predicted Functional Partners:
coxB
Cytochrome-c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.891
CV_0134
Probable acetyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/COG0454.
 
     0.791
petB
Ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.732
CV_4233
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1512.
    
   0.732
CV_0133
Probable transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/COG1167.
     
 0.715
CV_0132
Hypothetical protein.
       0.709
CV_4364
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2847.
  
 
   0.690
cyoA
Cytochrome o ubiquinol oxidase, subunit II; Identified by sequence similarity; putative; ORF located using Blastx/COG1622/TC:3.D.4.5.1.
   
 
 0.626
glpR2
Glycerol-3-phosphate regulon repressor; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1349.
       0.597
coxC
Cytochrome-c oxidase, subunit III; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1845/TC:3.D.4.7.1.
    
   0.557
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.