Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CV_0207Probable two-component system, regulatory protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3279. (242 aa)    
Predicted Functional Partners:
CV_0103
Probable two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2972.
 
 
 0.990
CV_1419
Probable transmembrane sensor histidine kinase transcription regulator protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
 
 0.878
CV_1771
Probable sensor kinase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
 
 
 0.874
CV_1665
Probable two-component system sensor kinase; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG3275.
 
 
 0.853
CV_0206
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0457.
  
  
 0.776
pilS
Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0642.
 
   
 0.644
uvrD
DNA helicase II; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0210.
       0.514
CV_0473
Probable sensor histidine kinase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
  
   
 0.491
CV_1919
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0784.
  
   
 0.441
CV_0761
Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0745.
  
   
 0.431
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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