STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_0210Probable transcriptional regulator, MarR family; Identified by sequence similarity; putative; ORF located using Blastx. (138 aa)    
Predicted Functional Partners:
ohr2
Organic hydroperoxide resistance protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1764.
  
 0.977
ohr1
Organic hydroperoxide resistance protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1764.
  
 0.906
CV_1324
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1764.
  
  
 0.661
CV_2756
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1765.
     
 0.653
CV_0211
Hypothetical protein.
       0.491
CV_1895
Probable thioredoxin-disulfide reductase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0526.
      
 0.485
CV_3905
Probable transcriptional regulator, MarR family; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1846.
  
     0.416
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.