Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CV_0230 | CV_0231 | CV_0230 | CV_0231 | Probable aminoglycoside N6'-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to the 6'-amino group of aminoglycoside molecules conferring resistance to antibiotics containing the purpurosamine ring. | Probable hemolysin; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1253/TC:9.B.37.2.1. | 0.773 |
CV_0230 | ung | CV_0230 | CV_0232 | Probable aminoglycoside N6'-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to the 6'-amino group of aminoglycoside molecules conferring resistance to antibiotics containing the purpurosamine ring. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.571 |
CV_0231 | CV_0230 | CV_0231 | CV_0230 | Probable hemolysin; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1253/TC:9.B.37.2.1. | Probable aminoglycoside N6'-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to the 6'-amino group of aminoglycoside molecules conferring resistance to antibiotics containing the purpurosamine ring. | 0.773 |
CV_0231 | guaA | CV_0231 | CV_3465 | Probable hemolysin; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1253/TC:9.B.37.2.1. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.419 |
CV_0231 | ung | CV_0231 | CV_0232 | Probable hemolysin; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1253/TC:9.B.37.2.1. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.559 |
CV_0231 | ybeY | CV_0231 | CV_4152 | Probable hemolysin; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1253/TC:9.B.37.2.1. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.474 |
guaA | CV_0231 | CV_3465 | CV_0231 | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | Probable hemolysin; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1253/TC:9.B.37.2.1. | 0.419 |
ung | CV_0230 | CV_0232 | CV_0230 | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | Probable aminoglycoside N6'-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to the 6'-amino group of aminoglycoside molecules conferring resistance to antibiotics containing the purpurosamine ring. | 0.571 |
ung | CV_0231 | CV_0232 | CV_0231 | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | Probable hemolysin; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1253/TC:9.B.37.2.1. | 0.559 |
ybeY | CV_0231 | CV_4152 | CV_0231 | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Probable hemolysin; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1253/TC:9.B.37.2.1. | 0.474 |