Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CV_0309 | capH | CV_0309 | CV_4024 | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3672. | Capsular polysaccharide synthesis enzyme O-acetyl transferase; Identified by sequence similarity; putative; ORF located using Blastx. | 0.682 |
| CV_0309 | petA | CV_0309 | CV_4008 | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3672. | Ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.729 |
| CV_0309 | rarD | CV_0309 | CV_0304 | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3672. | rarD protein, chloamphenicol sensitive; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2962/TC:2.A.7.7.1. | 0.682 |
| capH | CV_0309 | CV_4024 | CV_0309 | Capsular polysaccharide synthesis enzyme O-acetyl transferase; Identified by sequence similarity; putative; ORF located using Blastx. | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3672. | 0.682 |
| capH | petA | CV_4024 | CV_4008 | Capsular polysaccharide synthesis enzyme O-acetyl transferase; Identified by sequence similarity; putative; ORF located using Blastx. | Ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.682 |
| capH | rarD | CV_4024 | CV_0304 | Capsular polysaccharide synthesis enzyme O-acetyl transferase; Identified by sequence similarity; putative; ORF located using Blastx. | rarD protein, chloamphenicol sensitive; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2962/TC:2.A.7.7.1. | 0.682 |
| petA | CV_0309 | CV_4008 | CV_0309 | Ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3672. | 0.729 |
| petA | capH | CV_4008 | CV_4024 | Ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Capsular polysaccharide synthesis enzyme O-acetyl transferase; Identified by sequence similarity; putative; ORF located using Blastx. | 0.682 |
| petA | rarD | CV_4008 | CV_0304 | Ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | rarD protein, chloamphenicol sensitive; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2962/TC:2.A.7.7.1. | 0.682 |
| rarD | CV_0309 | CV_0304 | CV_0309 | rarD protein, chloamphenicol sensitive; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2962/TC:2.A.7.7.1. | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3672. | 0.682 |
| rarD | capH | CV_0304 | CV_4024 | rarD protein, chloamphenicol sensitive; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2962/TC:2.A.7.7.1. | Capsular polysaccharide synthesis enzyme O-acetyl transferase; Identified by sequence similarity; putative; ORF located using Blastx. | 0.682 |
| rarD | petA | CV_0304 | CV_4008 | rarD protein, chloamphenicol sensitive; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2962/TC:2.A.7.7.1. | Ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.682 |