Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (556 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1228; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 0.999
hutH
Histidine ammonia-lyase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2986; Belongs to the PAL/histidase family.
 
 0.999
hutG
Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
 
  
 0.900
hutC
Histidine utilization repressor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2188.
 
  
 0.866
CV_4105
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx.
 
  
 0.644
pilU2
Twitching mobility protein transport fimbria; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2805.
      
 0.643
CV_0324
Hypothetical protein.
       0.625
pilC
Fimbrial assembly transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1459/TC:3.A.15.1.1.
      
 0.612
pilU1
Twitching motility protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2805.
      
 0.602
gcvP
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.597
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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