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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_0359Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2206. (291 aa)    
Predicted Functional Partners:
CV_0812
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2199.
 
 
 0.961
CV_4087
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2199.
 
   0.958
CV_0387
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2202.
 
   0.955
CV_3461
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1196.
 
   0.951
CV_3504
Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using Blastx.
 
   
 0.926
CV_1582
Probable GGDEF family protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2202.
 
 
 0.914
CV_3737
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2199.
 
 
   0.913
CV_0208
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2199.
 
   0.908
CV_4135
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0840.
 
   0.906
CV_1143
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG2199.
 
 
   0.883
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.