Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phnAAlkylphosphonate uptake protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2824. (111 aa)    
Predicted Functional Partners:
hprK
Probable kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).
 
      0.691
vacJ
Lipoprotein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2853.
       0.563
CV_0445
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3113.
       0.563
CV_0446
Probable ABC superfamily, transport protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2854.
       0.563
ispB
Octaprenyl-diphosphate synthase; Identified by sequence similarity; putative; ORF located using Blastx/COG0142; Belongs to the FPP/GGPP synthase family.
      0.555
CV_0442
Hypothetical protein.
     
 0.529
rplQ
50S ribosomal protein L17; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0203.
   
    0.459
CV_0447
Probable ABC transport system substrate-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1463.
       0.428
CV_0448
Probable ABC transport system permease protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0767.
       0.423
CV_0449
Probable ABC transport system ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1127.
       0.423
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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