Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sojChromosome partitioning protein ParA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1192/TC:8.A.3.2.1. (258 aa)    
Predicted Functional Partners:
parB
Chromosome partitioning protein ParB; Identified by sequence similarity; putative; ORF located using Blastx/COG1475; Belongs to the ParB family.
 
 0.970
CV_2672
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
  
 
 0.743
CV_1317
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3109.
   
    0.672
CV_0474
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0532.
       0.628
CV_0476
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx.
       0.597
bscA
Cellulose synthase, subunit A; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1215/TC:9.B.32.1.3.
  
 
 0.585
hmsR
Haemin storage system, HmsR protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1215/TC:9.B.32.1.3.
  
 
 0.585
ftsZ
Cell division protein ftsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.549
dnaA
Chromosomal replication iniciator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.
 
 
 
 0.531
CV_0494
Probable outer membrane receptor protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.3.1.
  
 
   0.509
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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