Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CV_0482Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3419. (1040 aa)    
Predicted Functional Partners:
pilE3
Type IV pilin; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2165.
 
  
 0.966
CV_0484
Probable type IV prepilin; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2165.
 
  
 0.951
CV_0480
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
  
 0.935
CV_0479
Probable type-4 fimbrial biogenesis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2165.
 
  
 0.903
pilV
Type-4 fimbrial biogenesis PilV transmembrane protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2165.
 
  
 0.895
pilE1
Type IV pilin; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2165.
 
  
 0.873
CV_3114
Probable type-4 fimbrial biogenesis transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
  
 0.859
CV_3111
Probable type-4 fimbrial pilin related signal peptide protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2165.
 
  
 0.857
pilN
Type 4 fimbrial biogenesis protein PilN; Identified by sequence similarity; putative; ORF located using Blastx.
 
  
 0.841
CV_4079
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2165.
 
  
 0.833
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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