Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
parAChromosome partitioning protein, ParA family ATPase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1192/TC:8.A.3.3.2. (263 aa)    
Predicted Functional Partners:
parB
Chromosome partitioning protein ParB; Identified by sequence similarity; putative; ORF located using Blastx/COG1475; Belongs to the ParB family.
 
 0.997
gidB
Glucose inhibited division protein B; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
 
  
 0.961
bscA
Cellulose synthase, subunit A; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1215/TC:9.B.32.1.3.
  
 
 0.825
gidA
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
  
    0.809
CV_2672
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
  
 
 0.809
CV_2394
Probable cell division ftsk transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1674/TC:3.A.12.1.2; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.693
bcsB
Cellulose synthase, subunit B; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
 
 0.685
ftsK
Cell division ftsk transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1674/TC:3.A.12.1.2.
  
  
 0.668
hmsR
Haemin storage system, HmsR protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1215/TC:9.B.32.1.3.
  
 
 0.585
ftsZ
Cell division protein ftsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.575
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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