Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_0768Probable outer membrane multidrug resistance lipoprotein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1538. (476 aa)    
Predicted Functional Partners:
emrA
Multidrug resistance secretion protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1566/TC:8.A.1.1.1.
 
 0.972
CV_0766
Probable multidrug resistance protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0477/TC:2.A.1.3.2; Belongs to the major facilitator superfamily.
 
 
 0.904
CV_0435
Probable multidrug efflux membrane permease; Identified by sequence similarity; putative; ORF located using Blastx/COG0845/TC:8.A.1.6.1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.804
CV_2240
Probable multidrug efflux protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0845/TC:8.A.1.6.1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.801
emrR
Transcriptional repressor emr operon, MarR family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1846.
     
 0.795
macB
Probable ABC transporter, ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.783
CV_0709
Probable multidrug resistance transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1566/TC:8.A.1.1.1.
 
 
 0.745
acrB
Acriflavin resistance protein B; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0841/TC:2.A.6.2.2.
 
 0.743
acrD
Acriflavin resistance protein D; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0841/TC:2.A.6.2.7.
 
 0.724
CV_1769
Probable resistance protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0477/TC:2.A.1.11.1.
  
   
 0.710
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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