STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CV_0781Hypothetical protein. (410 aa)    
Predicted Functional Partners:
CV_0782
Hypothetical protein.
  
  
 0.893
CV_4083
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2165.
  
  
 0.805
CV_0780
Hypothetical protein.
  
  
 0.696
CV_0482
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3419.
  
  
 0.678
CV_3115
Probable type-4 fimbrial biogenesis pily1-related protein; Identified by sequence similarity; putative; ORF located using Blastx/COG3419.
  
  
 0.678
CV_0479
Probable type-4 fimbrial biogenesis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2165.
  
  
 0.628
pilV
Type-4 fimbrial biogenesis PilV transmembrane protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2165.
  
  
 0.628
CV_3114
Probable type-4 fimbrial biogenesis transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx.
  
  
 0.575
CV_0481
Hypothetical protein.
  
  
 0.548
pilE3
Type IV pilin; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2165.
  
  
 0.544
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.