Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_0873Probable methyl-accepting chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0840. (420 aa)    
Predicted Functional Partners:
aer
Aerotaxis receptor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2202.
  
 
 0.879
CV_3450
Probable chemotaxis protein CheA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0643.
 
   0.862
cheA2
Chemotaxis protein CheA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0643.
 
   0.861
cheA1
Chemotaxis protein CheA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0643.
 
   0.861
cheA
Chemotaxis protein CheA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0643.
 
   0.857
cheW3
Signal transduction chemotaxis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0835.
 
 
 0.833
cheW1
Signal transduction chemotaxis protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0835.
 
 
 0.830
cheV3
Chemotaxis protein CheV; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
 
 
 0.817
CV_3139
Probable protein-glutamate methylesterase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2201.
 
   0.799
CV_1580
Probable two-component hybrid sensor-regulator protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2201.
 
 
 0.793
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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