Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CV_0875Probable carbonic anhydrase, family 3; Identified by sequence similarity; putative; ORF located using Blastx/COG0663. (181 aa)    
Predicted Functional Partners:
CV_0874
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1714.
     
 0.774
CV_1136
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0288/TC:2.C.1.2.1.
    
 
 0.761
cynT
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.761
CV_0520
Probable carbonate dehydratase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0288.
    
 
 0.758
CV_2035
Probable glyoxylase I family protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0346.
 
    0.697
dsdA
D-serine dehydratase; Identified by sequence similarity; putative; ORF located using Blastx/COG3048; Belongs to the serine/threonine dehydratase family. DsdA subfamily.
 
      0.685
CV_2363
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG1956.
      0.684
CV_0168
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
    
 
 0.659
prlC
Identified by sequence similarity; putative; ORF located using Blastx/COG0339.
       0.592
cobW
Cobalamin synthesis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0523.
  
  
 0.485
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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