STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qseBTranscriptional regulatory protein qseB; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0745. (220 aa)    
Predicted Functional Partners:
qseC
Sensor protein qseC; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
 0.998
armS
Two-component sensor kinase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642.
 
 0.983
CV_2635
Probable two-component response regulator; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0745.
  
  
 
0.906
CV_0473
Probable sensor histidine kinase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
 
 0.900
CV_1621
Probable sensor/response regulatory hybrid protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
  
 
 0.893
CV_1951
Probable two-component sensor; Identified by sequence similarity; putative; ORF located using Blastx/COG0784.
  
 
 0.884
CV_2643
Probable sensor/response regulator hybrid; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
  
 
 0.884
CV_3248
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0784.
  
 
 0.884
evgS
Sensor protein evgS precursor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
 
 
 0.874
CV_0594
Probable two-component sensor histidine kinase protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642.
 
 
 0.834
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.