Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
hydGTwo-component response sensor- transcriptional regulatory protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784. (174 aa)    
Predicted Functional Partners:
CV_0896
Probable two-component sensor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0642.
 0.998
CV_3089
Probable two-component system; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
 
   
 0.585
oprC
Outer membrane protein OprC complement; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.4.2.
       0.581
CV_0473
Probable sensor histidine kinase protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
 
 
 
 0.509
alkK
acyl-CoA synthetase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0318/TC:9.B.17.1.4.
       0.500
CV_2324
Probable two-component sensor; Identified by sequence similarity; putative; ORF located using Blastx/COG0642.
 
   
 0.499
CV_3503
Probable sensor/response regulator hybrid; Identified by sequence similarity; putative; ORF located using Blastx/COG0784.
  
 
 0.474
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
    0.465
CV_1621
Probable sensor/response regulatory hybrid protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0784.
   
 
 0.443
CV_1951
Probable two-component sensor; Identified by sequence similarity; putative; ORF located using Blastx/COG0784.
   
 
 0.443
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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