Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plcNNon-hemolytic phospholipase C precursor; Identified by sequence similarity; putative; ORF located using Blastx/COG3511. (656 aa)    
Predicted Functional Partners:
CV_4039
Probable phosphatidylglycerol phosphate synthetase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1502.
     
 0.909
dgkA
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
 0.904
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
 0.901
suhB2
Myo-inositol-1(or 4)-monophosphatase; Identified by sequence similarity; putative; ORF located using Blastx/COG0483.
     
  0.900
pgpA
Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
     
  0.900
suhB
Myo-inositol-1(or 4)-monophosphatase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0483; Belongs to the inositol monophosphatase superfamily.
     
  0.900
CV_4378
Probable phosphatidylethanolamine N-methyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0500.
     
  0.900
pssA
CDPdiacylglycerol-serine O-phosphatidyltransferase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1502.
     
 0.802
lapB
Probable periplasmic protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.
      
 0.539
CV_0554
Probable carbohydrate-binding protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3397.
      
 0.528
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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