Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
chrAChromate ion transporter protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2059/TC:2.A.51.1.1. (393 aa)    
Predicted Functional Partners:
chrB
Chromate resistance signal peptide protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx.
 
   
 0.980
CV_1118
Probable transmembrane protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2059/TC:2.A.51.1.3.
 
     0.734
mgtE
Magnesium transporter; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG2239/TC:9.A.19.2.1.
      
 0.649
ppK
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
     
 0.612
sodB2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.524
sodB1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.515
mtrA
GTP cyclohydrolase I; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0302.
      
 0.453
ppx
Exopolyphosphatase; Identified by sequence similarity; putative; ORF located using Blastx.
      
 0.450
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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